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3 | <HTML_CONTENT xmlns:ibis="http://www.ibisph.org"> |
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4 | |
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5 | <TITLE>Tracking Methods</TITLE> |
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6 | |
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7 | <CONTENT> |
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8 | <h2>Data Processing and Analysis in the NM EPHT Network</h2> |
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9 | <br/> |
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10 | <ul class="Indent"> |
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11 | <li> |
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12 | <a href="#geocoding">Geocoding</a> |
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13 | </li> |
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14 | <li> |
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15 | <a href="#age-adjust">Age Adjustment in Analysis</a> |
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16 | </li> |
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17 | <li> |
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18 | <a href="#time-series">Time Series Data and Analysis</a> |
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19 | </li> |
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20 | <li> |
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21 | <a href="#linking">Linking Health and Environmental Data</a> |
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22 | </li> |
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23 | <li> |
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24 | <a href="#metadata">Metadata</a> |
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25 | </li> |
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26 | <li> |
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27 | <a href="#satellite">Satellite Data</a> |
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28 | </li> |
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29 | </ul> |
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30 | |
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31 | |
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32 | <a name="geocoding"/> |
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33 | |
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34 | <br/><br/> |
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35 | <h4>Geocoding</h4> |
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36 | <br/> |
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37 | The geocoding of health outcome and environmental data is a way to assign geographic |
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38 | locators to the data, thus enabling linkage of multiple types of data. Much of our |
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39 | data are geocoded with latitude-longitude coordinates assigned to a street address. |
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40 | Street address, city, county, zip code, and Census tract are the fields typically |
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41 | used to geocode Tracking data. |
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42 | |
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43 | <br/><br/> |
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44 | This <a href="contentfile/pdf/Geocoding_WAthas_Dec05.pdf" title="PDF file with EPHT geocoding process information"> |
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45 | PDF report</a> describes some of the details of geocoding cancer data and some of the |
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46 | issues associated with these efforts. |
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47 | |
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48 | |
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49 | <a href="#backtotop">back to top</a> |
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50 | |
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51 | |
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52 | |
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53 | <a name="age-adjust"/> |
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54 | |
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55 | <br/><br/> |
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56 | <h4>Age Adjustment in Analysis</h4> |
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57 | <br/><br/> |
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58 | Rates might require adjusting due to factors such as age. If the groups differ with respect |
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59 | to this factor, rates cannot be correctly compared unless the factor is adjusted for. For age, |
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60 | the general practice is to adjust rates to a standard population (e.g., the United States |
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61 | population from the 2000 Census). Using this practice, the mortality rate for Florida and |
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62 | the mortality rate for Alaska would both be age-adjusted to the U.S. standard population. |
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63 | The two mortality rates could then be compared. |
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64 | |
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65 | <br/><br/> |
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66 | For mortality, age adjustment is calculated as follows: |
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67 | <ol class="Indent"> |
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68 | <li>Choose a standard population with a known distribution (U.S. Census 2000 Population).</li> |
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69 | <li>Calculate the age-specific death rates for the two populations (Alaska and Florida |
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70 | in this case).</li> |
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71 | <li>Calculate the age-specific expected number of deaths based on the standard population |
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72 | (multiply the age-specific death rates for the two states by the number of people in the |
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73 | respective age class in the standard population).</li> |
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74 | <li>For each state, add the expected numbers of deaths over all age classes. Divide the |
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75 | resulting total number of expected deaths by the total number of people in the standard |
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76 | population. These are the age-adjusted death rates.</li> |
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77 | </ol> |
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78 | |
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79 | <br/><br/> |
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80 | Age-adjusted rates are used for many of the diseases tracked on the NM EPHT site but are not |
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81 | always the preferred method for comparison. |
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82 | |
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83 | |
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84 | <a href="#backtotop">back to top</a> |
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85 | |
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86 | <a name="time-series"/> |
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87 | |
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88 | <br/><br/> |
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89 | |
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90 | <h4>Time Series Data and Analysis</h4> |
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91 | <br/> |
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92 | A <span class="Bold">time series</span> is a sequence of data points, typically measured at |
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93 | specified time intervals in order to understand the trends of the data over time. These |
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94 | trends can sometimes be used to forecast future events based on known past events, that |
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95 | is to predict future data points before they are measured. The term time series analysis |
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96 | is used to distinguish trend analysis from an analysis in which there is no natural ordering |
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97 | of the individual observations, and also from the spatial data analyses we use to relate |
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98 | our data to geographic locations. A time series model will generally reflect the fact that |
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99 | observations close together in time will be more closely related to each other than observations |
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100 | further apart in time. In addition, time series models will often make use of the natural |
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101 | one-way ordering of time so that values in a series for a given time will be expressed as |
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102 | deriving in some way from past values, rather than from future values. |
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103 | |
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104 | <br/><br/> |
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105 | The time series data presented on this site typically relate a health outcome, such as thyroid |
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106 | cancer, with time through representation of the health and time data on a graph. In the case of |
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107 | thyroid cancer, rates are increasing over time, whereas myocardial infarction rates are decreasing |
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108 | over time. In the case of arsenic concentrations in drinking water, rates are generally constant |
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109 | over time. All of these time series can be evaluated to determine the statistical significance |
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110 | of the changes and the magnitude of the rate of changes. |
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111 | |
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112 | |
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113 | <a href="#backtotop">back to top</a> |
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114 | |
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115 | |
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116 | |
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117 | <a name="linking"/> |
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118 | |
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119 | <br/><br/> |
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120 | <h4>Linking Health and Environmental Data</h4> |
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121 | <br/> |
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122 | Linkage studies refer to investigations that connect environmental and health outcome data in |
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123 | time and place within a population. The primary goal of linkage studies is to facilitate |
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124 | understanding of the relationship between diseases and the environment. A good example of the |
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125 | impact such studies may have is the removal of lead from gasoline in the 1970's, following a |
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126 | series of national linkage studies showing that blood lead levels decreased in direct relation |
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127 | to declining lead use in gasoline. In this instance, a clear cause-effect relationship existed |
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128 | between environmental hazard and health effect, and measuring the declining lead content of |
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129 | gasoline was relatively easy to do. |
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130 | |
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131 | <br/><br/> |
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132 | Unfortunately, for many diseases the cause-effect relationship is not clear, and environmental |
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133 | hazards cannot be measured as easily. Furthermore, many adverse health outcomes may result from |
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134 | exposures to multiple different hazards, some received in the short term and others received |
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135 | over a longer, more protracted time period. For these reasons, it is important that linkage be |
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136 | approached in a scientifically rigorous manner. However, even here, caution is needed in the |
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137 | interpretation of results since the environmental data used in linkage analysis ordinarily is |
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138 | not collected on an individual basis; rather, data are collected across broad populations, |
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139 | such as a county or particular region within a state. Consequently, a study that does find a |
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140 | relationship between the level of an environmental hazard and the occurrence of a health outcome |
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141 | cannot be used to conclude that the hazard actually caused the health outcome, since it is not |
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142 | known who among the population actually received exposure at the levels of interest. Rather, |
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143 | the results of such studies can be used to generate hypotheses on causation, which can then be |
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144 | tested in more formal studies involving recruitment of study subjects and collection of data |
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145 | n an individual level. |
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146 | |
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147 | <br/><br/> |
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148 | Detailed studies on health and environmental data linkages are presented at NM EPHT Health |
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149 | Effects: <a href="health_effects/linkage-studies.html">Health and Environment Linkage Studies</a>. |
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150 | |
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151 | |
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152 | <a href="#backtotop">back to top</a> |
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153 | |
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154 | |
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155 | |
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156 | <a name="metadata"/> |
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157 | |
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158 | <br/><br/> |
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159 | <h4>Metadata</h4> |
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160 | <br/> |
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161 | Metadata are "data about data." There are several types of metadata, and these can be broadly |
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162 | defined under the categories of Descriptive, Structural, and Administrative. (These are taken |
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163 | from the CDC EPHT <a href="contentfile/pdf/Metadata_FAQs.pdf" title="PDF: Metadata Frequently Asked Questions"> |
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164 | Metadata Workgroup's FAQ</a> document.) |
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165 | <ul class="Indent"> |
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166 | <li>Descriptive Metadata: Information that describes the content, quality, and context |
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167 | of a data resource for the purpose of facilitating identification and discovery. It may |
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168 | reference additional information like quality assurance documents and data dictionaries. |
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169 | Through descriptive metadata a user can learn the what, why, when, who, where, and how |
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170 | for a data resource.</li> |
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171 | <li>Structural Metadata: Information about how the item is put together or arranged such |
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172 | as the table of contents page, individual page numbers, or illustration. It basically |
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173 | describes the structure of an item, such as a book, so that all of the pages of that |
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174 | item can be displayed in the correct order. In the electronic world it facilitates |
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175 | navigation and presentation of electronic resources.</li> |
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176 | <li>Administrative Metadata: Includes information about resolution, bit depth, type |
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177 | of equipment used to produce the file, storage format, and file name and location. |
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178 | It can also include basic facts on ownership, rights, and reproduction information.</li> |
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179 | </ul> |
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180 | <br/><br/> |
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181 | The Environmental Public Health Tracking Network makes extensive use of Descriptive Metadata. |
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182 | Metadata are considered the backbone of the EPHT Network. |
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183 | Metadata Benefits: As more data are created and stored, there is a need to document data |
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184 | resources for future use and to improve accessibility. Creating Descriptive Metadata: |
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185 | <ul class="Indent"> |
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186 | <li>Helps an organization arrange and maintain its data assets.</li> |
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187 | <li>Limits duplication of effort by ensuring that others in the organization are aware |
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188 | of the existence of data resources.</li> |
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189 | <li>Assists in both determining and improving the quality of data resources.</li> |
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190 | <li>Improves an organization's ability to comply with rules, regulations, and policies |
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191 | related to data access.</li> |
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192 | <li>Reduces the loss of institutional memory for data resources when key staff move on.</li> |
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193 | <li>Provides information about an organization's data holdings so that users can locate |
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194 | available resources relevant to an area of interest or study.</li> |
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195 | <li>Provides the ability to advertise and promote the availability of data resources via |
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196 | online services.</li> |
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197 | <li>Supplies the means to document limitations about the data resource or disclaimers |
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198 | that are important for potential users to be aware of.</li> |
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199 | </ul> |
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200 | |
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201 | <br/><br/> |
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202 | The Centers for Disease Control and Prevention (CDC), through EPHT Grantee efforts on the |
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203 | Metadata Workgroup and a contract with Northrop Grumman, developed the EPHT Metadata Creation |
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204 | Tool (MCT). The EPHT MCT generates customized, FGDC-compliant metadata files from information |
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205 | entered into Web forms. A New Mexico version of this tool is provided on the NM EPHT Web server; |
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206 | those who wish to use the MCT to create metadata must be assigned a username and password. (FGDC: |
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207 | Federal Geographic Data Committee) |
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208 | <br/><br/> |
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209 | During this initial stage of New Mexico EPHT implementation access to the MCT will be restricted |
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210 | to NM Tracking Team members, who may request an EPHT MCT username and password from the NM EPHT |
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211 | Webmaster, doh-eheb AT state DOT nm DOT us. |
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212 | <ul class="Indent"> |
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213 | <li> |
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214 | <a href="contentfile/pdf/Metadata_Content_Guidance_Version_1-0.pdf" |
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215 | title="PDF: EPHT Metadata Content Guidance Document">Metadata Content Guidance |
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216 | Document, Version 1.0</a> (PDF) View or save this PDF Metadata Content Guidance |
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217 | Document that the EPHT Metadata Workgroup developed to explain metadata, show examples |
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218 | of environmental and health metadata records, and describe the Metadata Creation Tool.</li> |
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219 | <li> |
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220 | <a class="blank-target" href="http://epht-mct.unm.edu/" title="NM Metadata Creation Tool, requires password, external site opens in new tab or window"> |
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221 | New Mexico EPHT Metadata Creation Tool</a> (external Web site) Once you have received |
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222 | log-in information (username and password) from the NM EPHT Program, you can go to the |
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223 | Web site (http://epht-mct.unm.edu/), log in, and create your metadata file. Request an |
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224 | NM EPHT Metadata Creation Tool username and password New Mexico Tracking Team only: |
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225 | doh-eheb AT state DOT nm DOT us.</li> |
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226 | </ul> |
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227 | |
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228 | |
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229 | <a href="#backtotop">back to top</a> |
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230 | |
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231 | |
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232 | |
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233 | <a name="satellite"/> |
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234 | |
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235 | <br/><br/> |
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236 | <h4>Satellite Data</h4> |
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237 | <br/> |
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238 | Satellite data provide spectral information for the Earth's surface, geology, waters, and |
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239 | atmosphere on a regular basis. Researchers and applied scientists use satellite data and |
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240 | derived data products for synoptic, repeated analysis of specific issues and questions. |
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241 | For example, data from the Visible Red (Red) and Near Infrared (NIR) spectral ranges can |
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242 | be calculated to provide an index for vegetation greenness, the Normalized Difference Vegetation |
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243 | Index NDVI. NDVI = (NIR - Red)/(NIR + Red) |
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244 | <br/><br/> |
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245 | Vegetation greenness provides an indication of water content in plants (as with stages |
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246 | of agricultural crop growth), indicates areas of no vegetation (such as areas of rock or |
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247 | snow cover), and shows changes in land cover and plant health over time (for example, plant |
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248 | cover before a wildfire compared with, later, extent of the fire through lost vegetation). |
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249 | The land cover classification process (which categorizes type and extent of land cover) uses |
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250 | the vegetation index as a layer of information, in addition to the spectral satellite data |
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251 | and other identifying data. A land cover classification is useful as a layer of information |
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252 | in many analyses; for example, it provides a method for assigning values to plant types for |
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253 | how well they hold dirt particles on the ground, and is used in erosion and dust forecast models. |
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254 | |
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255 | <br/><br/> |
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256 | Much of the satellite data used in the NM EPHT Program comes from National Aeronautics and |
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257 | Space Administration (NASA) sensors. Learn more about <a class="blank-target" href="http://www.nasa.gov/topics/earth.html" |
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258 | title="NASA Earth Topics page, external site opens in new tab or window">NASA Earth programs</a> or |
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259 | browse <a class="blank-target" href="http://www.nasa.gov/topics/earth/earth_images_archive_1.html" |
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260 | title="NASA Earth Image Archives page, external site opens in new tab or window">NASA image galleries</a> |
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261 | (both are external sites). Landsat and MODIS data are commonly used in image analysis; browse the |
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262 | <a class="blank-target" href="http://landsat.gsfc.nasa.gov/images/" title="Landsat Image Gallery, |
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263 | external site opens in new tab or window">Landsat image gallery</a> and the <a class="blank-target" |
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264 | href="http://modis.gsfc.nasa.gov/gallery/" title="MODIS Image Gallery, external site opens in new |
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265 | tab or window">MODIS image gallery</a> (both are external sites). There are numerous commercial |
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266 | satellites in orbit; the company GeoEye operates IKONOS and GeoEye-1. Browse the <a class="blank-target" |
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267 | href="http://www.geoeye.com/CorpSite/gallery/default.aspx" title="GeoEye Image Gallery, external site |
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268 | opens in new tab or window">GeoEye image gallery</a> (external site). This PDF file, <a href="contentfile/pdf/TBudge_remotesensing.pdf"> |
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269 | TBudge_remotesensing.pdf</a>, was created from a PowerPoint presentation developed by Tom Budge, |
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270 | Remote Sensing Manager at The University of New Mexico Earth Data Analysis Center. It describes |
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271 | many of the satellite sensors and their image products, the significance of pixel and temporal |
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272 | resolutions, and differences in information between 8-bit and 11-bit data. Note: The PDF file is |
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273 | 13.6 MB and will take a while to download or load into the browser, depending upon your Internet connection. |
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274 | |
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275 | |
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276 | <a href="#backtotop">back to top</a> |
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277 | |
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278 | |
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279 | <br/><br/> |
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280 | The four images below illustrate slides from an EPHT PowerPoint presentation on using NASA satellite data products in the NM EPHT Program. |
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281 | <br/><br/> |
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282 | <img class="imgItem" src="contentfile/image/satellitedata_slide1.jpg" alt="Satellite Data slide 1" height="488" width="650" /> |
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283 | <a href="#backtotop">back to top</a> |
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284 | |
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285 | <br/><br/> |
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286 | <img src="contentfile/image/satellitedata_slide2.jpg" alt="Satellite Data slide 2" height="488" width="650" /> |
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287 | <a href="#backtotop">back to top</a> |
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288 | |
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289 | <br/><br/> |
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290 | <img src="contentfile/image/satellitedata_slide3.jpg" alt="Satellite Data slide 3" height="488" width="650" /> |
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291 | <a href="#backtotop">back to top</a> |
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292 | |
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293 | <br/><br/> |
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294 | <img src="contentfile/image/satellitedata_slide4.jpg" alt="Satellite Data slide 4" height="488" width="650" /> |
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295 | <a href="#backtotop">back to top</a> |
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296 | |
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297 | </CONTENT> |
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298 | </HTML_CONTENT> |
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